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Home » Recipes » Dessert » Bars + Brownies » Healthy Lemon Bars

Apr 3, 2020(updated August 23, 2022)

Healthy Lemon Bars

3.99 from 210 votes
By Dani Spies
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These healthy lemon bars are light, creamy and perfectly tart.  The crust is made with whole wheat flour and the light lemon filling is 100% free of dairy and refined sugars.  Perfect for Easter, Mother’s Day or a summer cookout, this recipe will be your new best friend.

fresh baked lemon bars

Healthy lemon bars make the perfect dessert for Easter, Mother’s Day or any time you are looking for a simple, delicious high quality sweet.

Made with everyday, wholesome ingredients; they are surprisingly easy to make and promise to be a crowd pleaser!  I didn’t realize how much I liked lemon bars until I made this recipe.  They are SO good and I can’t wait for you to give them a try.

fresh baked lemon bars

How To Make Healthy Lemon Bars

Unlike refined white flours, whole wheat flour includes the wheat germ, the bran and endosperm – so it still contains all of its nutrients, plus its a great source of fiber and has 6 grams of protein per serving.

If you wanted a lighter texture for the crust, you can always do half whole wheat and half white flour.  So as always, we’ve got options. Here’s what you do:

  1. Preheat oven to 350 F.
  2. Combine whole wheat flour, coconut oil, maple syrup and salt. Mix until a wet, but firm consistency (like shortbread) is formed.
  3. Line an 8×8 ceramic pan with parchment paper.
  4. Press dough into lined pan, making sure to press it out evenly and into the corners.
  5. Bake for 20 minutes or until fragrant and set through. Let cool.
  6. In the meantime, combine ingredients for filling and beat until smooth, liquid batter is formed.
  7. Pour mixture on top of the cooled crust and bake for 30 minutes.
  8. Cool, chill + enjoy!
lemon bars with powered sugar

Do I need to refrigerate lemon bars?

You can leave your lemon bars at room temperature for a few hours, but it’s important to store them in the refrigerator after that.

How long will they last?

These lemon bars will last up to 5 days in the fridge and up to 3 months in the freezer.

Can you store them in the freezer?

Absolutely! I highly recommend you give frozen lemon bars a try on a hot summer day.

More Clean & Delicious Dessert Ideas:

  • Avocado Brownies
  • Vanilla Mug Cake
  • Oatmeal Raisin Cookies
lemon bars on white marble

I’d love to know if you try this (or any) recipe! Tag @clean_and_delicious on Instagram to let me know and be sure to subscribe to our mailing list to receive more healthy, delicious recipes straight to your inbox.  

lemon bars
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3.99 from 210 votes

Healthy Lemon Bars

These healthy lemon bars are light, creamy and perfectly tart.   Perfect for Easter, Mother’s Day or a summer cookout!
Course: bars + brownies, dairy free, DESSERT, nut free
Cuisine: American
Author: Dani Spies
Prep Time10 minutes mins
Cook Time50 minutes mins
Total Time1 hour hr
Servings: 16
Calories: 124kcal

Ingredients

Crust

  • 3/4 cup whole wheat flour
  • 1/3 cup coconut oil
  • 1/4 cup maple syrup
  • 1/4 tsp kosher salt

Filling

  • 6 eggs
  • 4 tsp lemon zest
  • 1/2 cup lemon juice
  • 1/3 cup honey
  • 1/4 tsp kosher salt
  • 4 tsp coconut flour
US Customary – Metric

Instructions

Crust

  • Preheat oven to 350 F.
  • In a large bowl, combine whole wheat flour, coconut oil, maple syrup and salt. Mix well until a wet, but firm consistence (like shortbread) is formed.
  • Line an 8×8 ceramic pan with parchment paper.
  • Press dough into lined pan, making sure to press it out evenly and into the corners.
  • Bake for 20 minutes or until fragrant, lightly browned and set through. Let cool.

Filling

  • While crust is baking, combine eggs, lemon zest, lemon juice, honey, salt and coconut flour. Beat with a hand mixer until a smooth, liquid batter is formed. It will be runny, but don't worry, this is they way it's supposed to be.
  • Pour mixture on top of the cooled crust and bake for 30 minutes. Cool completely then chill for 4 hours.
  • Remove bars from pan, cut into 16 squares and top with a shake of powdered sugar. Serve and enjoy!

Notes

  • I used a ceramic baking dish lined with parchment for this recipe.  I’ve found that glass pans tend to burn more easily.  
  • The coconut oil can be swapped out for softened butter if you prefer.
  • When pressing the crust batter into the pan, make sure to press it all the way out to the edges of the pan and in to the corners.

Nutrition

Serving: 1bar | Calories: 124kcal | Carbohydrates: 15g | Protein: 3g | Fat: 6g | Saturated Fat: 5g | Cholesterol: 61mg | Sodium: 100mg | Potassium: 66mg | Fiber: 1g | Sugar: 9g | Vitamin A: 89IU | Vitamin C: 4mg | Calcium: 17mg | Iron: 1mg

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Bars + Brownies, Category Featured, Dairy Free, Dessert, Diet, Nut Free, Recipes, Video

About Dani Spies

Dani Spies is the founder and host of Clean & Delicious; a weekly cooking show on YouTube and a healthy eating blog that celebrates real, whole foods! She takes a holistic approach to health and wellness and is loved for her approachable, down to earth style both in and out of the kitchen.

Learn MoreWork With Me

Reader Interactions

Yum! I love this recipe.

    3.99 from 210 votes (200 ratings without comment)

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    If you loved this recipe please leave a comment and star rating below. Questions are also welcome. Cheers!

    Recipe Rating




    Comments

  1. Lee-an says

    April 3, 2020 at 2:05 pm

    hello, thank you for sharing can’t wait to try it, never made lemon bars so it will be a first for me.
    Big fan love your youtube videos
    drinking plenty of your ginger turmeric honey mix love it
    stay safe

    Reply
    • Dani says

      April 3, 2020 at 4:57 pm

      That was my first time, too! And I actually enjoyed them so much more than I thought I would. I hope you get to give them a try and I’m so glad you’re enjoying the tea 🙂

      Reply
  2. Santiago says

    April 3, 2020 at 3:05 pm

    5 stars
    Wow, these look really good Dani. Now that our fave food blogger has revealed to us how ez they’re to make I def will be putting some of these together this weekend

    Reply
    • Dani says

      April 3, 2020 at 4:51 pm

      Awesome! I hope you guys enjoy them as much as we do. Stay well 🙂

      Reply
  3. Amanda Atwood says

    April 3, 2020 at 3:35 pm

    The lemon bars look yummy! How can you make these gluten-free?

    Reply
    • Dani says

      April 3, 2020 at 4:48 pm

      Great question, Amanda! I haven’t tried this out yet with a gluten free crust, but if you decide to experiment, I would love to hear how it goes.

      Reply
      • Val says

        April 3, 2020 at 8:29 pm

        Hi Dani. I tried using almond flour inplace of the whole wheat flour and when I put the lemon mixture on top, parts of the crust went into
        It :(. I have auto immune issues so need gluten free. Wondering if you have any suggestions. I used 3/4. CUps of almond flour. Only thing I changed in the recipe.

        Thanks so much for your wonderful recipes.

        Reply
        • Terri says

          November 10, 2021 at 4:51 am

          I think GF oat flour would work as a replacement

          Reply
  4. Annette says

    April 3, 2020 at 5:12 pm

    I am wondering can I use Bob’s 1:1 gluten free flour for crust??

    Reply
    • Dani says

      April 4, 2020 at 7:33 am

      I am pretty sure that would work Annette!

      Reply
  5. Sandra Carter says

    April 4, 2020 at 6:41 pm

    I don’t have a ceramic pan. Can I use metal? Maybe with a cookie sheet under it too?

    Reply
    • Dani says

      May 13, 2020 at 9:24 pm

      You can, but you may need to adjust cooking times a bit.

      Reply
  6. Christal says

    April 6, 2020 at 5:08 pm

    Hi,
    How can you make theses vegan?
    Thanks!

    Reply
    • Dani says

      May 13, 2020 at 9:24 pm

      Because this recipe calls for so many eggs it would be tough to make vegan without really changing things up! I would need to experiment a bit!

      Reply
  7. Natalia Sell says

    April 7, 2020 at 3:11 pm

    Hi Dani,
    My 4 year old and I are so excited to make these today! Baking and new recipes is a great way to keep busy while staying home. I only have olive oil, avocado oil and vegetable oil on hand. Which would be the best substitute for coconut oil? Thanks so much!!! Hope you guys are staying safe and healthy.

    Reply
  8. Chris Tang from Malaysia says

    April 10, 2020 at 12:19 pm

    Hi Dani!
    I can’t get whole wheat flour at this time. Is it ok to substitute it with all purpose flour?
    I love lemon bars! Can hardly wait to try making some!
    Love your healthy wholesome recipes,they are always easy-to-follow!
    Thanks so much, Dani!

    Reply
    • Dani says

      May 13, 2020 at 9:24 pm

      Yes, that would definitely work.

      Reply
  9. Beatrice M. says

    April 14, 2020 at 2:12 pm

    Holy smokes those look so good. I am going to pick up the ingredients as soon as this quarantine is over!

    Reply
    • Dani says

      May 13, 2020 at 9:25 pm

      Awesome!! Enjoy them Beatrice.

      Reply
  10. Kim says

    April 14, 2020 at 11:17 pm

    Oh dear – my crust floated. What happened? I baked the crust for 20 minutes and let it cool. It had shrunk slightly from the sides of the pan so I carefully poured the egg mixture hoping it wouldn’t run under the crust but it did regardless. I pushed it down and baked it anyway. It’s now cooling the 4 hrs. What did I do wrong?

    Reply
    • Dani says

      May 13, 2020 at 9:28 pm

      The first thing that comes to mind is that the crust was not completely cooled? I made this recipe several times and never had that issue – but I see a few readers ran into the same problem!

      Reply
    • Katie says

      May 27, 2023 at 7:41 am

      Mine only started floating during baking. I let the crust cool overnight. There were no big gaps between crust and pan but maybe the tiny tiny spaces were enough

      Reply
  11. Anna says

    April 17, 2020 at 11:40 pm

    Hi! I made this today and when I was baking the filling with the bottom, the bottom absorbed the filling 🙁 I don’t know what’s the problem. I’m thinking either I didn’t let the bottom let cool completely but I’m not sure because it was just a little warm not hot or anything

    Reply
    • Dani says

      April 22, 2020 at 12:43 pm

      That’s SO weird! Was your crust pushed all the way out to the sides of the pan? I also wonder if it was cooked through? That should not have happened.

      Reply
  12. Monika says

    April 18, 2020 at 5:57 am

    5 stars
    Hi Dani,
    Best dessert recipe yet! My definate favourite! I am so glad I have found your website so I can finally bake. Thank you

    Reply
    • Dani says

      April 22, 2020 at 12:40 pm

      Hi Monika! So glad you enjoyed them. Thanks for taking the time to leave a review!

      Reply
  13. EW says

    April 18, 2020 at 6:24 pm

    4 stars
    Great recipe! Would almond or coconut flour work instead of white whole wheat flour for a more subtle crust flavor? Thank you!

    Reply
    • Dani says

      April 21, 2020 at 12:48 pm

      I’m sure there is a way to make it work but it wouldn’t be an even swap. You will have to adjust the ingredients a bit. May take some trial and error.

      Reply
  14. Connie says

    April 19, 2020 at 3:06 pm

    Can I use a different oil and almond flour in this Healthy Lemon Bars recipe instead of coconut oil and coconut flour? Not a fan of anything coconut flavored.

    Reply
  15. laurie says

    April 21, 2020 at 12:14 pm

    I’m excited to make these. Thinking of making mini me tarts instead since I have a silicone tray for that.
    Thank you for sharing!

    Reply
    • Dani says

      April 21, 2020 at 12:36 pm

      That sounds good! Enjoy it.

      Reply
  16. Nina says

    April 30, 2020 at 6:42 pm

    A very late question, I’m sorry, but can I use pastry flour instead of whole wheat four? I have some pastry flour left over that I really want to use up.

    Reply
    • Dani says

      May 13, 2020 at 9:25 pm

      That should work just fine!

      Reply
  17. Veena says

    July 4, 2020 at 2:54 am

    5 stars
    I made these today and they were soooo delicious!!! I followed the directions exactly and even throw in some ground flax seed into the crust for another nutritious boost and it came out great!
    Dani I love your recipes and my 5 yo is your biggest little fan. He’s always saying, “mmm…mmm…MMMM!!!!” whenever I cook something he likes :))

    Reply
  18. Alex says

    July 5, 2020 at 10:04 am

    3 stars
    I made these and they tasted delicious!

    However – my crust floated to the top. I saw the comments about the crust floating for others ahead of making the recipe so I followed all the steps I could to prevent it. I pushed the dough mixture right to the edges of the 8 x 8 pan – but when it baked it contracted so there was a gap between the pan and the dough. I made sure to cool the crust completely in the fridge before pouring the filling mixture on top. While baking the crust floated anyways. They were messy to serve, but still tasted great.

    Reply
  19. angie says

    April 21, 2021 at 4:18 pm

    5 stars
    hey bakers!
    while looking at “lemon bar tips and tricks” to ensure i make them correctly so i dont waste ingredients, i noticed all other recipes state to pour the lemon mixture WHILE the crust is still warm, like—fresh out of the oven warm! (which should prevent any rising/soggy issues!) hope this helped 🙂

    Reply
  20. Connie M Norris says

    May 28, 2021 at 6:12 pm

    5 stars
    Researched substituting almond flour for the coconut flour in the filling. Does this sound right to you? “Unlike coconut flour, almond flour is not that absorbent, so you will have to reduce the amount of liquid used in recipes that were created for coconut flour, and you will need to increase the amount of almond flour nearly four times.”

    Reply
  21. Lupe says

    May 28, 2022 at 5:04 pm

    These sound very good. What can I substitute the coconut flour in the filling with? I tried coconut flour before in other desserts, and I didn’t enjoy the way they came out.

    Reply
    • Dani Spies says

      May 29, 2022 at 11:37 am

      That’s a good question! I would have to experiment a bit to know for sure. Coconut flour is different than most flours as it is very absorbent – I so it wouldn’t be an even swap.

      Reply
  22. Sally says

    July 1, 2024 at 5:28 pm

    Hey Dani
    I would love to see a lemon pudding, that is at least partially sweetened with monk fruit or stevia.
    Please and thank you!

    Reply
    • Holly M. says

      August 25, 2025 at 6:14 pm

      Me too, please!

      Reply
  23. Substitute wheat flour with almond flour! says

    August 8, 2024 at 8:44 am

    5 stars
    I love these! I substituted the wheat flour with almond flour and it gave the crust a great nutty flavor that went with the lemon. It also adds more to your protein and fiber intake!

    Reply
  24. Janet says

    December 8, 2024 at 8:57 pm

    4 stars
    I love your recipe, especially since you include whole wheat flour, and plan to make it soon since I recently “inherited” a bucketful of lemons.
    The following is submitted as educational material since your site emphasizes “healthy” foods:

    As a scientist, I want to point out that even though there are some heathy components in maple syrup, the sweetness is 99% derived from the disaccharide sucrose. Apparently during the processing of maple syrup, the sucrose is broken apart into it’s 2 constituent molecules – glucose and fructose (Wikipedia). In the body, fructose is converted into glucose which is the main fuel for most, if not all, animals.
    So maple syrup is not a sugar-free food. The term “sugar” used in this sentence means the FDA definition, which I think only includes the sugars our bodies can metabolize.

    Chemically the term “sugar” means a class of carbohydrates where attached to most of the Carbon atoms, there is an Oxygen atom or, more commonly an Oxygen with a Hydrogen atom, called an “OH or hydroxyl group”. So for example the Ribose in RNA and the Deoxy-ribose in DNA are both “sugars”.
    There are available, as you may know, alternative sugars or other types of sweeteners, many of which are more and more in use commercially (xylitol, erythritol, stevia, monkfruit, etc. which are basically also “natural sugars/sweeteners”.) On the Nutrition label of foods, you may see, under “Carbohydrates”, after a zero for “sugar”, the term “Polyols” with a value. This is another way to chemically define a sugar (by the presence of those OH groups). So the term polyols used there refers to sugars like xylitol, etc. And, in fact sucrose, fructose and lactose are also polyols (but not by FDA sanctioned terms).

    I am quite sensitive to sucrose, so when cooking or baking I substitute erythritol and a small amount of stevia, which meet the definition of “non-glycemic” which means we don’t have the enzymes necessary to use them for energy. There are of course downsides to some of these other “natural sugars” and it behooves anyone wishing to switch, to do some research. For example, in the past year or two, studies have been published linking erythritol to heart problems. Personally I tend to be suspicious of these studies since I know the sugar industry has huge presence in food ingredients and a huge lobby! (An old book called “Sugar Blues” by William Duffy documents all this.)
    If you got all the way through this – Congratulations!

    Reply
  25. Cristine says

    October 10, 2025 at 1:10 pm

    5 stars
    Fantastic recipe! So easy to make and so delicious! Satisfies the craving for a sweet treat without adding a ton of empty calories.

    Reply

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